Package index

All functions

BuildColorStyles()

xxxx

Build_enriched_qdata()

xxxx

convert_dataset_ui() convert_dataset_server() convert_dataset()

Wrapper to Convert pipeline

Prostar2()

xxx

add.resourcePath()

Add resource paths

mod_buildDesign_ui() mod_buildDesign_server() mod_buildDesign()

xxxx

build_report_ui() build_report_server() build_report()

dl

addDatasets() keepDatasets()

Datasets processing

mod_designExample_ui() mod_designExample_server() mod_designExample()

xxxx

diffAnaVolcanoplot_rCharts()

Volcanoplot of the differential analysis

download_dataset_ui() download_dataset_server() download_dataset()

dl

mod_filtering_example_ui() mod_filtering_example_server() mod_filtering_example()

Filtering example Shiny module

mod_ds_metacell_Histos_ui() mod_ds_metacell_Histos_server() mod_ds_metacell_Histos()

Displays a correlation matrix of the quantitative data of a numeric matrix.

mod_metacell_tree_ui() mod_metacell_tree_server() mod_metacell_tree()

Displays a correlation matrix of the quantitative data of a numeric matrix.

mod_checkUpdates_ui() mod_checkUpdates_server() checkUpdates()

xxxx

mod_DetQuantImpValues_ui() mod_DetQuantImpValues_server() mod_DetQuantImpValues()

popover_for_help_ui and popover_for_help_server

mod_Metacell_Filtering_ui() mod_Metacell_Filtering_server() mod_Metacell_Filtering()

Filtering Shiny module

mod_Pept_Imputation_ui() mod_Pept_Imputation_server() mod_Pept_Imputation()

Filtering Shiny module

mod_Pirat_ui() mod_Pirat_server() mod_Pirat()

Pirat shiny app

mod_Prot_Normalization_ui() mod_Prot_Normalization_server() mod_Prot_Normalization()

Filtering Shiny module

mod_Agregation_ui() mod_Agregation_server()

Module agregation

export_dataset_ui() export_dataset_server() export_dataset()

Export dataset Shiyny app

mod_inputGroup_ui() mod_inputGroup_server() mod_inputGroup()

Help popover windows

mod_mv_plots_ui() mod_mv_plots_server() mod_mv_plots()

xxx

mod_qMetacell_FunctionFilter_Generator_ui() mod_qMetacell_FunctionFilter_Generator_server() mod_qMetacell_FunctionFilter_Generator()

Build queries for filtering quantitative metadata

mod_set_pval_threshold_ui() mod_set_pval_threshold_server() mod_set_pval_threshold()

Module set pval threshold

mod_tracker_ui() mod_tracker_server() mod_tracker()

Tracking of entities within plots

pkgs.require()

Loads packages

mod_volcanoplot_ui() mod_volcanoplot_server() volcanoplot()

popover_for_help_ui and popover_for_help_server