Compute the number of peptides used to aggregate proteins

This function computes the number of peptides used to aggregate proteins.

Usage

CountPep(X)

Arguments

X

A "valued" adjacency matrix in which lines and columns correspond respectively to peptides and proteins.

Value

A vector of boolean which is the adjacency matrix but with NA values if they exist in the intensity matrix.

Author

Alexia Dorffer

Examples

if (FALSE) { # \dontrun{
data(Exp1_R25_pept, package="DaparToolshedData")
obj.pep <- Exp1_R25_pept[seq_len(10)]
last.obj <- obj.pep[[length(obj.pep)]]
X <- BuildAdjacencyMatrix(last.obj)
CountPep(X)
} # }