Wrapper for One-way Anova statistical test
Arguments
- obj
An object of class
QFeatures.- i
xxx
- with_post_hoc
a character string with 2 possible values: "Yes" and "No" (default) saying if function must perform a Post-Hoc test or not.
- post_hoc_test
character string, possible values are "No" (for no test; default value) or TukeyHSD" or "Dunnett". See details of
postHocTest()function to choose the appropriate one.
Value
A list of two dataframes. First one called "logFC" contains all pairwise comparisons logFC values (one column for one comparison) for each analysed feature (Except in the case without post-hoc testing, for which NAs are returned.); The second one named "P_Value" contains the corresponding p-values.
Details
This function allows to perform a 1-way Analysis of Variance. Also
computes the post-hoc tests if the with_post_hoc parameter is set to
yes. There are two possible post-hoc tests: the Tukey Honest Significant
Differences (specified as "TukeyHSD") and the Dunnett test
(specified as "Dunnett").